Publication
2020年以降出版かつ当研究室研究者が責任著者の論文のみを記載しております。
2025
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To be listed soon!
2024
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Yoshizawa S, Konishi K, Koiwai K, Hirono I, Kondo H, “Organ-specific repertoires of IgNAR gene in a cartilaginous fish” Fish Shellfish Immunol. (2025) 161: 110299. doi.org/10.1016/j.fsi.2025.110299
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Guzman JPM, Mwamburi SM, Konishi K, Aoki M, Kuwahara H, Mikata K, Koiwai K, Kondo H, Hirono I, “Assessing the impact of Lactiplantibacillus plantarum feed additive on Vibrio parahaemolyticus crosstalk and the gill and gut microbiota compositions in Penaeus vannamei” Aquaculture (2025) 742092. doi.org/10.1016/j.aquaculture.2024.742092
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Yuasa H, Koiwai K, Konishi K, Furukawa M, Nozaki R, Kondo H, Hirono I, “Genome sequence of Vibrio harveyi strain TUMSAT-2019, isolated from kuruma shrimp, Penaeus japonicus” Microbiol. Resour. Announc. (2024) doi.org/10.1128/mra.00746-24
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Guzman JPM, Nozaki R, Aoki M, Kuwahara H, Mikata K, Koiwai K, Kondo H, Hirono I, “Transcriptome analyses of mRNA and circular RNAs reveal dietary supplementation with freeze-dried Lactiplantibacillus plantarum primes immune memory of White leg shrimp (Penaeus vannamei) against pathogens” Fish Shellfish Immunol. (2024) 110091. doi.org/10.1016/j.fsi.2024.110091
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Elfadadny MR, Furukawa M, Nozaki R, Kawato S, Koiwai K, Kondo H, Hirono I, “Effect of organic selenium on performance and gill transcriptome of whiteleg shrimp Penaeus vannamei” Mol. Bio. Rep. (2024) 52: 48. doi.org/10.1007/s11033-024-10147-x
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Puttirungroj P, Kawato S, Mwamburi SM, Furukawa M, Oomine R, Koiwai K, Kondo H, Hirono I, “Comparative genomics highlights the virulence and evolutionary trajectory of white spot syndrome virus” J. Gen. Virol (2024) 105. doi.org/10.1099/jgv.0.002042
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Takase K, Harakawa A, Yokota M, Lau LM, Amano Y, Ichida K, Koiwai K, Hirono I, Kondo H, “Effects of anti-rainbow trout germ-cell monoclonal antibody on germ cells and gonadal tissues in rainbow trout (Oncorhynchus mykiss)” Aquaculture. (2025) 595: 741605. doi.org/10.1016/j.aquaculture.2024.741605
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Wayha S, Koiwai K, Sano M, Hirono I, Kondo H, “Application of nervous necrosis virus capsid protein-based antigen-presenting particles for vaccine development” Fish Shellfish Immunol. (2024) 152: 109803. doi.org/10.1016/j.fsi.2024.109803
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Imaizumi K, Nozaki R, Konishi K, Tagishi H, Miura T, Kondo H, Hirono I, “Investigating the impact of chlorine dioxide in shrimp-rearing water on stomach microbiome, gill transcriptome, and infection-related mortality in shrimp” J. Appl. Microbiol. (2024) doi.org/10.1093/jambio/lxae176
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Yoshizawa S, Ishida Y, Nakashima C, Murotani F, Hara T, Yoshii K, Yamada H, Fukuda Y, Nozaki R, Koiwai K, Hirono I, Kondo H, “Systemic immune responses do not affect significant immune responses in the skin” Fish Shellfish Immunol. (2024) 152: 109756. doi.org/10.1016/j.fsi.2024.109756
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Alolod GAL, Matsumoto S, Koiwai K, Kondo H, Hirono I, “First report of white muscle disease caused by Photobacterium damselae subsp. damselae in Kuruma shrimp (Penaeus japonicus)” Aquqcult. (2024) doi.org/10.1016/j.aquaculture.2024.741278
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Elfadadny MR, Mwamburi SM, Kondo H, Hirono I, “Effects of organic selenium-containing diets on Penaeus vannamei molecular response under induced heat stress challenge” Fisheries Sci. (2024) doi.org/10.1007/s12562-024-01801-1
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Mwamburi SM. Kawato S, Furukawa M, Konishi K, Nozaki R, Hirono I, Kondo H, “De novo assembly and annotation of the Siganus fuscescens (Houttuyn, 1782) genome: marking a pioneering advance for the Siganidae family” Mar. Biotechnol. (2024) doi.org/10.1007/s10126-024-10325-9
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Thanomchaisanit P, Koiwai K, Osawa Y, Kuwahara D, Nohara S, Kondo H, Hirono I, “Astaxanthin supplementation enhances low-temperature stress tolerance, immune-related genes, and resistance to Vibrio parahaemolyticus in Whiteleg Shrimp Penaeus vannamei” Fisheries Sci. (2024) doi.org/10.1007/s12562-024-01777-y
2023
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Kawato S, Nozaki R, Kondo H, Hirono I, “Metagenome-assembled genomes of three Hepatoplasmataceae provide insights into isopod-mollicute symbiosis”. Access Microbiol. (2023) doi.org/10.1099/acmi.0.000592.v2
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Kawato S, Nozaki R, Kondo H, Hirono I, “Integrase-associated niche differentiation of endogenous large DNA viruses in crustaceans”. Microbiol. Spectr.(2023) doi.org/10.1128/spectrum.00559-23
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Eurlaphan C, Nozaki R, Sano M, Koiwai K, Hirono I, Kondo H, “Red sea bream iridovirus infection downregulates inflammation-related genes in the spleen of rock bream (Oplegnathus fasciatus)”, J. Fish Dis. (2023) doi.org/10.1111/jfd.13858
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Kawato S, Omine R, Teruya S, Kubo H, Yasumoto S, Kondo H, Takahashi Y, Nozaki R, Kondo H, Hirono I, “Evolutionary genomics of white spot syndrome virus”, Fisheries Science (2023) doi.org/10.1007/s12562-023-01715-4
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Imaizumi K, Sano M, Kondo H, Hirono I, “Insights into a chitin synthase of kuruma shrimp Penaeus japonicus and its role in peritrophic membrane and cuticle formation”, Mar. Biotechnol. (2023) doi.org/10.1007/s10126-023-10244-1
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Kondo H, Kamei H, Murotani F, Nozaki R, Yazawa R, Tani R, Koiwai K, Hirono I, “A novel liver-specific immunoglobulin heavy chain-like gene in a cartilaginous fish”, Fish Shellfish Immunol. Rep. (2023) 5(15): 100102. doi.org/10.1016/j.fsirep.2023.100102
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Koiwai K, Kondo H, Hirono I, “scRNA-seq analysis of hemocytes of penaeid shrimp under virus infection”, Mar. Biotechnol. (2023) 25: 488-502. doi.org/10.1007/s10126-023-10221-8
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Mahmoud MM, Abdelsalam M, Kawato S, Harakawa S, Kawakami H, Hirono I, Kondo H, “Comparative genome analyses of three serotypes of Lactococcus bacteria isolated from diseased cultured striped jack (Pseudocaranx dentex)”, J Fish Dis. (2023). doi.org/10.1111/jfd.13792
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Wang L, Yoshii K, Murase N, Yamada H, Fukuda Y, Hirono I, Kondo H, “Type I interferon induced by polyinosinic-polycytidylic acid does not contribute to the efficacy of a formalin-killed cell vaccine against Edwardsiella piscicida in the Japanese flounder (Paralichthys olivaceus)”, Fish Shellfish Immunol. (2023) 108680. doi.org/10.1016/j.fsi.2023.108680
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Rathnapala JMSN, Ragab W, Kawato S, Furukawa M, Nozaki R, Kondo H, Hirono I, “Genomic characterization and identification of virulence-related genes in Vibrio nigripulchritudo isolated from white leg shrimp Penaeus vannamei”, J. Fish Dis. (2023) doi.org/10.1111/jfd.13786
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Takase K, Nozaki R, Harakawa A, Yokota M, Hirono I, Kondo H, “Effect of autoantibody against follicle stimulating hormone (Fsh) induced by DNA vaccine in rainbow trout Oncorhynchus mykiss”, Aquaculture (2023) 738931. doi.org/10.1016/j.aquaculture.2022.738931
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Kawato S, Fujishima S, Nozaki R, Kondo H, Hirono I, “Genome sequence of Chionoecetes opilio bacilliform virus, a nimavirus infecting the snow crab Chionoecetes opilio”, Arch. Virol. (2023) 168. doi.org/10.1007/s00705-023-05731-8
2022
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Ishihara H, Harakawa S, Kawakami H, Yoshii K, Murase N, Yamada H, Fukuda Y, Nozaki R, Kawato S, Koiwai K, Hirono I, Kondo H, “Whole-genome analysis of red sea bream iridovirus spread in 2021 in Japan provided epidemiological and viral traits insight,” J. Fish Dis. (2022). doi.org/10.1111/jfd.13690
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Kondo H, Murotani F, Koiwai K, Hirono I, “Chicken-type lysozyme is a major bacteriolytic enzyme in the blood of the banded houndshark Triakis scyllium,” Dev. Comp. Immunol. (2022) 104448. doi.org/10.1016/j.dci.2022.104448
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Imaizumi K, Molex W, Jitnavee C, Direkbusarakom S, Kondo, H, Hirono I, “Bacterial and eukaryotic communities in pond water of whiteleg shrimp Litopenaeus vannamei and the bacterial communities of their stomach and midgut,” Aquaculture (2022) 738139. doi.org/10.1016/j.aquaculture.2022.738139
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Ragab W, Kawato S, Nozaki R, Kondo H, Hirono I, “Comparative genome analyses of five Vibrio penaeicida strains provide insights into their virulence-related factors,” Microbial Genomics (2022) 8(2):000766. doi.org/10.1099/mgen.0.000766
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Weerachatyanukul W, Pooljun C, Hirono I, Kondo, H, Chotwiwatthanakun C, Jariyapong P, “Infectious hypodermal and hematopoietic necrosis virus-like particle (IHHNV-VLP) induces peroxiredoxin expression and activity in Fenneropenaeus merguiensis,” Fish Shellfish Immunol. (2022) 121:53-61. doi.org/10.1016/j.fsi.2021.12.015
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Jaree P, Boonchuen P, Thawonsuwan J, Kondo H, Hirono I, Somboonwiwat K, “Transcriptome profiling reveals the novel immunometabolism-related genes against WSSV infection from Fenneropenaeus merguiensis,” Fish Shellfish Immunol. (2022) 120:31-44. doi: 10.1016/j.fsi.2021.11.006.
2021
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Kawato S, Nishitsuji K, Arimoto A, Hisata K, Kawamitsu M, Nozaki R, Kondo H, Shinzato C, Ohira T, Satoh N, Shoguchi E, Hirono I, “Genome and transcriptome assemblies of the kuruma shrimp, Marsupenaeus japonicus,” G3 (2021) 11(11):jkab268. doi: 10.1093/g3journal/jkab268.
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Imaizumi K, Tinwongger S, Kondo H, Hirono I, “Analysis of microbiota in the stomach and midgut of two penaeid shrimps during probiotic feeding,” Sci. Rep. (2021) 11 (1):9936. doi: 10.1038/s41598-021-89415-w.
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Koiwai K, Koyama T, Tsuda S, Toyoda A, Kikuchi K, Suzuki H, Kawano R, “Single-cell RNA-seq analysis reveals penaeid shrimp hemocyte subpopulations and cell differentiation process,” eLife (2021) 16;10:e66954. doi: 10.7554/eLife.66954.
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Ahmed RE, Chanthra N, Anzai T, Koiwai K, Murakami T, Suzuki H, Hanazono Y, Uosaki H, “Sarcomere Shortening of Pluripotent Stem Cell-Derived Cardiomyocytes using Fluorescent-Tagged Sarcomere Proteins,” J. Vis. Exp. 3;(169). doi: 10.3791/62129.
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Kondo H, Fujimura T, Murotani F, Yazawa R, Tani R, Hirono I, “Preliminary characterization of pathogen-detection activities of serum antibodies from the banded houndshark Triakis scyllium,” Dev. Comp. Immunol. (2021) 124:104186. doi: 10.1016/j.dci.2021.104186.
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Sakseepipad C, Nozaki R, Yoshii K, Fukuda Y, Mizuno K, Kawakami H, Hirono I, Kondo H, “Development of single nucleotide polymorphism (SNP) application for detection and genotyping of RSIV-type megalocytiviruses,” J. Fish Dis. (2021) 44 (9):1337-1342. doi: 10.1111/jfd.13392.
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Zhao B, Diao J, Li L, Kondo H, Li L, Hirono I, “Molecular characterization and expression analysis of Japanese flounder ( Paralichthys olivaceus) chemokine receptor CXCR2 in comparison with CXCR1,” Dev. Comp. Immunol. (2021) 120:104047. doi: 10.1016/j.dci.2021.104047.
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Weerachatyanukul W, Pooljun C, Hirono I, Kondo H, Chotwiwatthanakun C, Jariyapong P, “Infectious hypodermal and hematopoietic necrosis virus-like particle (IHHNV-VLP) induces peroxiredoxin expression and activity in Fenneropenaeus merguiensis,” Fish Shellfish Immunol. (2021) 121:53-61. doi: 10.1016/j.fsi.2021.12.015.
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Kagaya K, Kogure R, Okai M, Kawato S, Kondo H, Hirono I, Ishida M, “Draft Genome Sequences of the Lipid-Degrading Bacteria Moritella sp. Strains F1 and F3, Isolated from Mesopelagic Seawater from the Sagami Trough, in Japan,” Microbiol. Resour. Announc. (2021) 10 (33):e0004621. doi: 10.1128/MRA.00046-21.
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Sato M, Kawato S, Oyama H, Kaneko G, Post EJ, Suo R, Takai N, Sugita H, Kondo H, Hirono I, Itoi S, “Phylogenetic position of the Atlantic Gnomefish, Scombrops oculatus (Teleostei: Scombropidae), within the genus Scombrops , inferred from the sequences of complete mitochondrial genome and cytochrome c oxidase subunit I genes,” Mitochondrial DNA B Resour. (2021) 6 (10):2852-2855. doi: 10.1080/23802359.2021.1971118.
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Sakulworakan R, Chokmangmeepisarn P, Dinh-Hung N, Sivaramasamy E, Hirono I, Chuanchuen R, Kayansamruaj P, Rodkhum C, “Insight Into Whole Genome of Aeromonas veronii Isolated From Freshwater Fish by Resistome Analysis Reveal Extensively Antibiotic Resistant Traits,” Front. Microbiol. (2021) 12 :733668. doi: 10.3389/fmicb.2021.733668.
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Kawato S, Nozaki R, Hirono I, Kondo H, “Genome Sequence of Lymphocystis Disease Virus 2 LCDV-JP_Oita_2018, Isolated from a Diseased Japanese Flounder ( Paralichthys olivaceus) in Japan,” Microbiol. Resour. Announc. (2021) 10(33):e0054721. doi: 10.1128/MRA.00547-21.
2020
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Yasumoto K, Koiwai K, Hiraoka K, Hirono I, Kondo H, “Characterization of natural antigen-specific antibodies from naïve sturgeon serum,” Dev. Comp. Immunol. (2020) 112:103770. doi: 10.1016/j.dci.2020.103770.
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Kawato S, Nozaki R, Kondo H, Hirono I, “Draft Genome Sequences of Vibrio atypicus Strains DSM 25292T and TUMSAT1,” Microbiol. Resour. Announc. (2020) 9(6):e01526-19. doi: 10.1128/MRA.01526-19.
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Palang I, Hirono I, Senapin S, Sirimanapong W, Withyachumnarnkul B, Vanichviriyakit R, “Cytotoxicity of Streptococcus agalactiae secretory protein on tilapia cultured cells,” J. Fish Dis. (2020) 43(10):1229-1236. doi: 10.1111/jfd.13230.
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Pumchan A, Krobthong S, Roytrakul S, Sawatdichaikul O, Kondo H, Hirono I, Areechon N, Unajak S, “Novel Chimeric Multiepitope Vaccine for Streptococcosis Disease in Nile Tilapia (Oreochromis niloticus Linn.),” Sci. Rep. (2020) 10(1):603. doi: 10.1038/s41598-019-57283-0.
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Kawato S, Lu J, Nozaki R, Kondo H, Hirono I, “Genome Sequence of Vibrio nigripulchritudo Strain TUMSAT-TG-2018, Isolated from Diseased Pacific White Shrimp, Litopenaeus vannamei,” Microbiol. Resour. Announc. (2020) 9(49):e01206-20. doi: 10.1128/MRA.01206-20.
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Pedrosa-Gerasmio IR, Kondo H, Hirono I, “Molecular cloning, characterization and gene expression analysis of aminolevulinic acid synthase in Litopenaeus vannamei,” Gene (2020) 736:144421. doi: 10.1016/j.gene.2020.144421.
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Kerddee P, Dinh-Hung N, Dong HT, Hirono I, Soontara C, Areechon N, Srisapoome P, Kayansamruaj P, “Molecular evidence for homologous strains of infectious spleen and kidney necrosis virus (ISKNV) genotype I infecting inland freshwater cultured Asian sea bass (Lates calcarifer) in Thailand,” Arch. Virol. (2021) 166(11):3061-3074. doi: 10.1007/s00705-021-05207-7.